KrakenParser is a collection of scripts designed to process Kraken2 reports and convert them into CSV format. This pipeline extracts taxonomic abundance data at six levels: After the pipeline finishes ...

You've got your first taste of writing your own functions in the previous exercises. You've learned how to add parameters to your own function definitions, return a value or multiple values with ...

Opening LibreOffice Calc or Excel to check if a CSV has 500 rows or 5,000? To verify low stock items? To spot pricing errors? There's a faster way that works on any Linux server or terminal. This ...

What's the best IDE for Python? Here's how IDLE, Komodo, PyCharm, PyDev, Microsoft's Python and Python Tools extensions for Visual Studio Code, and Spyder stack up. Of all the metrics you could use to ...

Optimized apps and websites start with well-built code. The truth, however, is that you don't need to worry about performance in 90% of your code, and probably 100% for many scripts. It doesn't matter ...